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ASmiR Selection

Oryza sativa AlternativeSplicing Gene

Total 42493 records in 1417 Pages. Current page: 1
1/1417 1 2 3 4 5 6 7 8 9 10 11 Next> Last>>

IDLocusAsregionStrandTypeCoordinatePositionSequence DescriptionSequencing PlatformInparanoid
1
LOC_Os01g61410
+
AltA
chr01:35511568-35511769;chr01:35511529-35511567;chr01:35511379-35511567
overlap(sense)
catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process
Illumina
2
LOC_Os09g26000
+
ExonS
chr09:15625666-15626573;chr09:15626575-15626662;chr09:15626663-15627217
up_897bp
cell,membrane,transport,cellular process,response to abiotic stimulus,cellular homeostasis,transporter activity
Illumina
3
LOC_Os05g51560
-
AltA
chr05:29573076-29573132;chr05:29573133-29573202;chr05:29573133-29573274
overlap(sense)
metabolic process,cellular process,nucleus,nucleotide binding,kinase activity,protein modification process,cytoplasm,plasma membrane,metabolic process,cellular process,nucleus,nucleotide binding,kinase activity,protein modification process,cytoplasm,plasma membrane,metabolic process,cellular process,nucleus,nucleotide binding,kinase activity,protein modification process,cytoplasm,plasma membrane
Illumina
4
LOC_Os10g41060
+
IntronR
chr10:22056240-22056308;chr10:22056309-22056397;chr10:22056398-22056455
overlap(sense)
cellular_component,signal transduction,lipid binding
Illumina
5
LOC_Os01g08700
-
AltA
chr01:4330123-4330190;chr01:4330191-4330215;chr01:4330191-4330332
overlap(sense)
biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development
Illumina
6
LOC_Os12g07350
+
ExonS
chr12:3623647-3625050;chr12:3625052-3625149;chr12:3625150-3625277
overlap(sense)
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,RNA binding,transferase activity,mitochondrion
Illumina
7
LOC_Os02g07880
+
AltD
chr02:4132917-4133002;chr02:4132853-4132916;chr02:4132779-4132852
overlap(sense)
molecular_function,cellular_component,biological_process,molecular_function,cellular_component,biological_process
Illumina
8
LOC_Os03g15860
+
ExonS
chr03:8751499-8751547;chr03:8751549-8751686;chr03:8751687-8751996
overlap(sense)
transport,membrane,vacuole,cellular process,mitochondrion,binding,peroxisome
Illumina
9
LOC_Os02g56250
+
AltD
chr02:34410393-34410543;chr02:34410304-34410392;chr02:34410207-34410303
overlap(sense)
biological_process,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,post-embryonic development,sequence-specific DNA binding transcription factor activity
Illumina
10
LOC_Os04g39840
-
IntronR
chr04:23729033-23729060;chr04:23728941-23729032;chr04:23728838-23728940
overlap(sense)
metabolic process,cellular_component,catalytic activity,cell wall,hydrolase activity,binding,carbohydrate metabolic process,cell,binding,hydrolase activity,metabolic process,carbohydrate metabolic process,catalytic activity
Illumina
11
LOC_Os08g29730
+
IntronR
chr08:18263703-18264071;chr08:18264072-18264877;chr08:18264878-18264976
down_770bp
molecular_function,Golgi apparatus,cellular component organization,cellular process
Illumina
12
LOC_Os05g38730
-
AltD
chr05:22729493-22729582;chr05:22729583-22729667;chr05:22729669-22729831
overlap(sense)
molecular_function,nucleus,biological_process,molecular_function,nucleus,biological_process
Illumina
13
LOC_Os06g38950
-
ExonS
chr06:23110855-23110950;chr06:23110727-23110854;chr06:23110117-23110726
overlap(sense)
transport,cellular process,cellular_component,hydrolase activity,transporter activity,catabolic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,plasma membrane
Illumina
--NA--
14
LOC_Os09g10710
-
AltA
chr09:5843610-5843696;chr09:5843697-5843727;chr09:5843697-5843818
overlap(sense)
molecular_function,biological_process,molecular_function,biological_process,molecular_function,biological_process
Illumina
15
LOC_Os05g33710
-
IntronR
chr05:19845229-19845510;chr05:19845140-19845228;chr05:19845048-19845139
overlap(sense)
intracellular,nucleotide binding,biological_process
Illumina
--NA--
16
LOC_Os09g29520
+
AltD
chr09:17962089-17962834;chr09:17960786-17962088;chr09:17960675-17960785
overlap(antisense)
kinase activity,protein binding,protein modification process,plasma membrane
Illumina
--NA--
17
LOC_Os01g41565
-
IntronR
chr01:23532556-23532762;chr01:23532423-23532555;chr01:23532308-23532422
overlap(sense)
cellular process,nucleotide binding,response to stress
Illumina
18
LOC_Os12g41830
-
ExonS
chr12:25913077-25913583;chr12:25912806-25913076;chr12:25911736-25912805
overlap(sense)
metabolic process,transferase activity,protein modification process,catalytic activity,cellular process,nucleic acid binding,plastid
Illumina
19
LOC_Os08g02996
-
AltD
chr08:1311617-1311724;chr08:1311725-1313703;chr08:1313705-1314828
overlap(sense)
cell,metabolic process,cellular process,kinase activity,protein modification process,cell,metabolic process,cellular process,kinase activity,protein modification process
Illumina
--NA--
20
LOC_Os03g46440
-
IntronR
chr03:26264146-26264371;chr03:26263937-26264145;chr03:26263734-26263936
overlap(sense)
response to stress,response to biotic stimulus,protein binding,response to stress,response to biotic stimulus,protein binding,response to stress,response to biotic stimulus,protein binding
Illumina
--NA--
21
LOC_Os02g49530
-
AltA
chr02:30278347-30278499;chr02:30278500-30278547;chr02:30278500-30279119
overlap(sense)
molecular_function,cellular_component,biological_process,molecular_function,cellular_component,biological_process
Illumina
22
LOC_Os11g31620
-
IntronR
chr11:18486313-18487110;chr11:18485867-18486312;chr11:18485353-18485866
overlap(sense)
binding,flower development,protein modification process,response to biotic stimulus,multicellular organismal development,catalytic activity,membrane,vacuole,protein binding
Illumina
--NA--
23
LOC_Os04g51180
-
AltD
chr04:30312936-30313173;chr04:30313174-30313279;chr04:30313281-30313367
overlap(sense)
lipid binding,cell,reproduction,post-embryonic development,response to endogenous stimulus,protein binding,nucleotide binding,plasma membrane,lipid binding,cell,reproduction,post-embryonic development,response to endogenous stimulus,protein binding,nucleotide binding,plasma membrane
Illumina
24
LOC_Os09g14700
-
AltA
chr09:8728836-8728917;chr09:8728918-8729041;chr09:8728918-8729613
overlap(sense)
catalytic activity,metabolic process,catalytic activity,metabolic process
Illumina
--NA--
25
LOC_Os09g14610
-
AltA
chr09:8658345-8658470;chr09:8658471-8658501;chr09:8658471-8659528
down_3219bp
regulation of gene expression, epigenetic,DNA metabolic process,RNA binding,metabolic process,nuclease activity,nucleotide binding,response to stress,response to biotic stimulus,intracellular,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,nucleic acid binding,protein binding,catabolic process,regulation of gene expression, epigenetic,DNA metabolic process,RNA binding,metabolic process,nuclease activity,nucleotide binding,response to stress,response to biotic stimulus,intracellular,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,nucleic acid binding,protein binding,catabolic process,regulation of gene expression, epigenetic,DNA metabolic process,RNA binding,metabolic process,nuclease activity,nucleotide binding,response to stress,response to biotic stimulus,intracellular,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,nucleic acid binding,protein binding,catabolic process
Illumina
--NA--
26
LOC_Os02g27110
-
AltA
chr02:15941750-15941865;chr02:15941866-15941908;chr02:15941866-15941979
overlap(sense)
signal transduction,cellular_component,lipid binding,plastid
Illumina
27
LOC_Os07g41570
+
IntronR
chr07:24913022-24913158;chr07:24913159-24913253;chr07:24913254-24913399
overlap(sense)
metabolic process,nucleotide binding,catabolic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,hydrolase activity,nucleic acid binding
Illumina
--NA--
28
LOC_Os04g39814
-
ExonS
chr04:23716555-23716679;chr04:23716497-23716554;chr04:23716398-23716496
overlap(sense)
metabolic process,cellular_component,catalytic activity,cell wall,hydrolase activity,binding,carbohydrate metabolic process,cell,binding,hydrolase activity,metabolic process,carbohydrate metabolic process,catalytic activity,binding,hydrolase activity,metabolic process,carbohydrate metabolic process,catalytic activity
Illumina
--NA--
29
LOC_Os07g30820
-
ExonS
chr07:18245312-18246555;chr07:18245193-18245311;chr07:18243952-18245192
overlap(sense)
binding,intracellular,biological_process,binding,intracellular,biological_process
Illumina
--NA--
30
LOC_Os03g56950
+
AltD
chr03:32432993-32433114;chr03:32432881-32432992;chr03:32432846-32432880
overlap(sense)
biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity
Illumina
IDLocusAsregionStrandTypeCoordinatePositionSequence DescriptionSequencing PlatformInparanoid
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