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ASmiR Selection

Oryza sativa AlternativeSplicing Gene

Total 42493 records in 1417 Pages. Current page: 1
1/1417 1 2 3 4 5 6 7 8 9 10 11 Next> Last>>

  • IDLocusAsregionStrandTypeCoordinatePositionSequence DescriptionSequencing PlatformInparanoid
    1
    LOC_Os01g61410
    +
    AltA
    chr01:35511568-35511769;chr01:35511529-35511567;chr01:35511379-35511567
    overlap(sense)
    catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process,catalytic activity,membrane,mitochondrion,metabolic process
    Illumina
    2
    LOC_Os09g26000
    +
    ExonS
    chr09:15625666-15626573;chr09:15626575-15626662;chr09:15626663-15627217
    up_897bp
    cell,membrane,transport,cellular process,response to abiotic stimulus,cellular homeostasis,transporter activity
    Illumina
    3
    LOC_Os05g51560
    -
    AltA
    chr05:29573076-29573132;chr05:29573133-29573202;chr05:29573133-29573274
    overlap(sense)
    metabolic process,cellular process,nucleus,nucleotide binding,kinase activity,protein modification process,cytoplasm,plasma membrane,metabolic process,cellular process,nucleus,nucleotide binding,kinase activity,protein modification process,cytoplasm,plasma membrane,metabolic process,cellular process,nucleus,nucleotide binding,kinase activity,protein modification process,cytoplasm,plasma membrane
    Illumina
    4
    LOC_Os10g41060
    +
    IntronR
    chr10:22056240-22056308;chr10:22056309-22056397;chr10:22056398-22056455
    overlap(sense)
    cellular_component,signal transduction,lipid binding
    Illumina
    5
    LOC_Os01g08700
    -
    AltA
    chr01:4330123-4330190;chr01:4330191-4330215;chr01:4330191-4330332
    overlap(sense)
    biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development,biological_process,nucleus,nucleoplasm,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,response to stress,response to abiotic stimulus,flower development,protein binding,reproduction,post-embryonic development
    Illumina
    6
    LOC_Os12g07350
    +
    ExonS
    chr12:3623647-3625050;chr12:3625052-3625149;chr12:3625150-3625277
    overlap(sense)
    nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,RNA binding,transferase activity,mitochondrion
    Illumina
    7
    LOC_Os02g07880
    +
    AltD
    chr02:4132917-4133002;chr02:4132853-4132916;chr02:4132779-4132852
    overlap(sense)
    molecular_function,cellular_component,biological_process,molecular_function,cellular_component,biological_process
    Illumina
    8
    LOC_Os03g15860
    +
    ExonS
    chr03:8751499-8751547;chr03:8751549-8751686;chr03:8751687-8751996
    overlap(sense)
    transport,membrane,vacuole,cellular process,mitochondrion,binding,peroxisome
    Illumina
    9
    LOC_Os02g56250
    +
    AltD
    chr02:34410393-34410543;chr02:34410304-34410392;chr02:34410207-34410303
    overlap(sense)
    biological_process,biosynthetic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,post-embryonic development,sequence-specific DNA binding transcription factor activity
    Illumina
    10
    LOC_Os04g39840
    -
    IntronR
    chr04:23729033-23729060;chr04:23728941-23729032;chr04:23728838-23728940
    overlap(sense)
    metabolic process,cellular_component,catalytic activity,cell wall,hydrolase activity,binding,carbohydrate metabolic process,cell,binding,hydrolase activity,metabolic process,carbohydrate metabolic process,catalytic activity
    Illumina
    11
    LOC_Os08g29730
    +
    IntronR
    chr08:18263703-18264071;chr08:18264072-18264877;chr08:18264878-18264976
    down_770bp
    molecular_function,Golgi apparatus,cellular component organization,cellular process
    Illumina
    12
    LOC_Os05g38730
    -
    AltD
    chr05:22729493-22729582;chr05:22729583-22729667;chr05:22729669-22729831
    overlap(sense)
    molecular_function,nucleus,biological_process,molecular_function,nucleus,biological_process
    Illumina
    13
    LOC_Os06g38950
    -
    ExonS
    chr06:23110855-23110950;chr06:23110727-23110854;chr06:23110117-23110726
    overlap(sense)
    transport,cellular process,cellular_component,hydrolase activity,transporter activity,catabolic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,plasma membrane
    Illumina
    --NA--
    14
    LOC_Os09g10710
    -
    AltA
    chr09:5843610-5843696;chr09:5843697-5843727;chr09:5843697-5843818
    overlap(sense)
    molecular_function,biological_process,molecular_function,biological_process,molecular_function,biological_process
    Illumina
    15
    LOC_Os05g33710
    -
    IntronR
    chr05:19845229-19845510;chr05:19845140-19845228;chr05:19845048-19845139
    overlap(sense)
    intracellular,nucleotide binding,biological_process
    Illumina
    --NA--
    16
    LOC_Os09g29520
    +
    AltD
    chr09:17962089-17962834;chr09:17960786-17962088;chr09:17960675-17960785
    overlap(antisense)
    kinase activity,protein binding,protein modification process,plasma membrane
    Illumina
    --NA--
    17
    LOC_Os01g41565
    -
    IntronR
    chr01:23532556-23532762;chr01:23532423-23532555;chr01:23532308-23532422
    overlap(sense)
    cellular process,nucleotide binding,response to stress
    Illumina
    18
    LOC_Os12g41830
    -
    ExonS
    chr12:25913077-25913583;chr12:25912806-25913076;chr12:25911736-25912805
    overlap(sense)
    metabolic process,transferase activity,protein modification process,catalytic activity,cellular process,nucleic acid binding,plastid
    Illumina
    19
    LOC_Os08g02996
    -
    AltD
    chr08:1311617-1311724;chr08:1311725-1313703;chr08:1313705-1314828
    overlap(sense)
    cell,metabolic process,cellular process,kinase activity,protein modification process,cell,metabolic process,cellular process,kinase activity,protein modification process
    Illumina
    --NA--
    20
    LOC_Os03g46440
    -
    IntronR
    chr03:26264146-26264371;chr03:26263937-26264145;chr03:26263734-26263936
    overlap(sense)
    response to stress,response to biotic stimulus,protein binding,response to stress,response to biotic stimulus,protein binding,response to stress,response to biotic stimulus,protein binding
    Illumina
    --NA--
    21
    LOC_Os02g49530
    -
    AltA
    chr02:30278347-30278499;chr02:30278500-30278547;chr02:30278500-30279119
    overlap(sense)
    molecular_function,cellular_component,biological_process,molecular_function,cellular_component,biological_process
    Illumina
    22
    LOC_Os11g31620
    -
    IntronR
    chr11:18486313-18487110;chr11:18485867-18486312;chr11:18485353-18485866
    overlap(sense)
    binding,flower development,protein modification process,response to biotic stimulus,multicellular organismal development,catalytic activity,membrane,vacuole,protein binding
    Illumina
    --NA--
    23
    LOC_Os04g51180
    -
    AltD
    chr04:30312936-30313173;chr04:30313174-30313279;chr04:30313281-30313367
    overlap(sense)
    lipid binding,cell,reproduction,post-embryonic development,response to endogenous stimulus,protein binding,nucleotide binding,plasma membrane,lipid binding,cell,reproduction,post-embryonic development,response to endogenous stimulus,protein binding,nucleotide binding,plasma membrane
    Illumina
    24
    LOC_Os09g14700
    -
    AltA
    chr09:8728836-8728917;chr09:8728918-8729041;chr09:8728918-8729613
    overlap(sense)
    catalytic activity,metabolic process,catalytic activity,metabolic process
    Illumina
    --NA--
    25
    LOC_Os09g14610
    -
    AltA
    chr09:8658345-8658470;chr09:8658471-8658501;chr09:8658471-8659528
    down_3219bp
    regulation of gene expression, epigenetic,DNA metabolic process,RNA binding,metabolic process,nuclease activity,nucleotide binding,response to stress,response to biotic stimulus,intracellular,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,nucleic acid binding,protein binding,catabolic process,regulation of gene expression, epigenetic,DNA metabolic process,RNA binding,metabolic process,nuclease activity,nucleotide binding,response to stress,response to biotic stimulus,intracellular,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,nucleic acid binding,protein binding,catabolic process,regulation of gene expression, epigenetic,DNA metabolic process,RNA binding,metabolic process,nuclease activity,nucleotide binding,response to stress,response to biotic stimulus,intracellular,hydrolase activity,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,nucleic acid binding,protein binding,catabolic process
    Illumina
    --NA--
    26
    LOC_Os02g27110
    -
    AltA
    chr02:15941750-15941865;chr02:15941866-15941908;chr02:15941866-15941979
    overlap(sense)
    signal transduction,cellular_component,lipid binding,plastid
    Illumina
    27
    LOC_Os07g41570
    +
    IntronR
    chr07:24913022-24913158;chr07:24913159-24913253;chr07:24913254-24913399
    overlap(sense)
    metabolic process,nucleotide binding,catabolic process,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,hydrolase activity,nucleic acid binding
    Illumina
    --NA--
    28
    LOC_Os04g39814
    -
    ExonS
    chr04:23716555-23716679;chr04:23716497-23716554;chr04:23716398-23716496
    overlap(sense)
    metabolic process,cellular_component,catalytic activity,cell wall,hydrolase activity,binding,carbohydrate metabolic process,cell,binding,hydrolase activity,metabolic process,carbohydrate metabolic process,catalytic activity,binding,hydrolase activity,metabolic process,carbohydrate metabolic process,catalytic activity
    Illumina
    --NA--
    29
    LOC_Os07g30820
    -
    ExonS
    chr07:18245312-18246555;chr07:18245193-18245311;chr07:18243952-18245192
    overlap(sense)
    binding,intracellular,biological_process,binding,intracellular,biological_process
    Illumina
    --NA--
    30
    LOC_Os03g56950
    +
    AltD
    chr03:32432993-32433114;chr03:32432881-32432992;chr03:32432846-32432880
    overlap(sense)
    biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity,biosynthetic process,cellular process,response to external stimulus,signal transduction,response to abiotic stimulus,DNA binding,nucleus,protein binding,nucleobase, nucleoside, nucleotide and nucleic acid metabolic process,sequence-specific DNA binding transcription factor activity
    Illumina