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ASmiR Selection

Solanum lycopersicum AlternativeSplicing Gene

Total 19063 records in 636 Pages. Current page: 1
1/636 1 2 3 4 5 6 7 8 9 10 11 Next> Last>>

IDLocusAsregionStrandTypeCoordinatePositionSequence DescriptionSequencing PlatformInparanoid
1
Solyc09g061860.2
+
AltA
ch09:60541975-60542081;ch09:60541896-60541974;ch09:60540219-60541974
overlap(sense)
Sterol 3-beta-glucosyltransferase (B6U4Q7_MAIZE)
Illumina
2
Solyc04g080090.2
-
IntronR
ch04:64368404-64368694;ch04:64368083-64368403;ch04:64368033-64368082
overlap(sense)
Phosphatase PTC7 homolog (C1BT38_9MAXI)
Illumina
--NA--
3
Solyc05g048810.2
-
IntronR
ch05:59499471-59499631;ch05:59499379-59499470;ch05:59499306-59499378
overlap(sense)
tRNA-specific adenosine deaminase (B0WPX1_CULQU)
Illumina
4
Solyc02g064800.2
+
AltA
ch02:35952397-35952837;ch02:35952016-35952396;ch02:35951921-35952396
overlap(sense)
Histone-binding protein RBBP7 (RBBP7_BOVIN)
Illumina
--NA--
5
Solyc10g085570.1
+
AltA
ch10:64687129-64687273;ch10:64687103-64687128;ch10:64687037-64687128
overlap(sense)
ob5371-CTR1-like protein kinase (manually curated)
Illumina
6
Solyc04g074490.2
+
ExonS
ch04:60481355-60482095;ch04:60482097-60482324;ch04:60482325-60483329
overlap(sense)
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 (JMJD6_DANRE)
Illumina
7
Solyc02g088940.2
+
IntronR
ch02:50859742-50859967;ch02:50859968-50860085;ch02:50860086-50860333
overlap(sense)
CTP synthase like protein (Q0WRY1_ARATH)
Illumina
--NA--
8
Solyc08g078370.2
-
AltA
ch08:62199096-62199099;ch08:62199100-62199156;ch08:62199100-62199246
overlap(sense)
Kinase pfkB family protein (Q7XDM4_ORYSJ)
Illumina
9
Solyc08g061260.2
-
IntronR
ch08:48361850-48362416;ch08:48361073-48361849;ch08:48360994-48361072
down_20030bp
G-protein-coupled receptor 1 (D7KC35_ARALY)
Illumina
10
Solyc01g096900.2
+
AltA
ch01:87899766-87899836;ch01:87899723-87899765;ch01:87899614-87899765
overlap(sense)
DNA gyrase subunit A family protein (D7L923_ARALY)
Illumina
11
Solyc04g049620.2
+
ExonS
ch04:42562747-42574737;ch04:42574739-42574800;ch04:42574801-42576008
overlap(sense)
Predicted CDS Pa_1_6620 (B2ABA0_PODAN)
Illumina
--NA--
12
Solyc05g054310.2
+
ExonS
ch05:64247838-64247912;ch05:64247914-64248132;ch05:64248133-64248302
overlap(sense)
Translation initiation factor 2 gamma subunit (Q684L1_9INSE)
Illumina
13
Solyc09g064920.2
-
ExonS
ch09:62446045-62446137;ch09:62445950-62446044;ch09:62445869-62445949
overlap(sense)
BHLH transcription factor (B6U846_MAIZE)
Illumina
--NA--
14
Solyc02g069950.2
+
ExonS
ch02:39734066-39734965;ch02:39734967-39735023;ch02:39735024-39735607
overlap(sense)
Ribosomal RNA assembly protein mis3 (C5FFH1_NANOT)
Illumina
15
Solyc08g006600.2
-
IntronR
ch08:1189895-1190038;ch08:1189779-1189894;ch08:1189726-1189778
overlap(sense)
Dynamin-2 (D0MQ53_PHYIN)
Illumina
--NA--
16
Solyc08g006600.2
-
AltD
ch08:1189166-1189725;ch08:1189726-1189893;ch08:1189895-1190038
overlap(sense)
Dynamin-2 (D0MQ53_PHYIN)
Illumina
--NA--
17
Solyc02g090180.2
+
IntronR
ch02:51806441-51806582;ch02:51806583-51806656;ch02:51806657-51806857
overlap(sense)
Oligopeptidase (Protease II) (A6EDE8_9SPHI)
Illumina
18
Solyc03g110900.2
-
AltD
ch03:61635210-61635315;ch03:61635316-61635476;ch03:61635478-61635663
overlap(sense)
Katanin p60 ATPase-containing subunit A-like 1 (KATL1_DANRE)
Illumina
--NA--
19
Solyc03g059260.2
-
AltD
ch03:28185235-28185361;ch03:28185362-28185387;ch03:28185389-28185511
overlap(sense)
Carboxyl-terminal-processing protease (B6T6L2_MAIZE)
Illumina
20
Solyc03g111260.2
+
IntronR
ch03:61871373-61871426;ch03:61871427-61871502;ch03:61871503-61871564
overlap(sense)
Metallo-beta-lactamase family protein (A3ERL5_9BACT)
Illumina
21
Solyc09g009090.2
+
AltD
ch09:2442066-2442287;ch09:2441993-2442065;ch09:2441863-2441992
overlap(sense)
CTR1-like protein kinase-3 (manually curated)
Illumina
22
Solyc11g005110.1
-
AltA
ch11:101785-101868;ch11:101869-102150;ch11:101869-104441
overlap(sense)
Polyglutamine binding protein 1 (A2AER7_MOUSE)
Illumina
23
Solyc03g062660.2
+
AltD
ch03:31776167-31776737;ch03:31775338-31776166;ch03:31774199-31775337
up_88372bp
Receptor like kinase, RLK
Illumina
24
Solyc03g062660.2
+
AltD
ch03:31776106-31776737;ch03:31776020-31776105;ch03:31775172-31776019
up_89054bp
Receptor like kinase, RLK
Illumina
25
Solyc01g008230.2
-
ExonS
ch01:2358184-2358582;ch01:2358034-2358183;ch01:2353834-2358033
down_1199bp
TCP transcription factor 15 (manually curated)
Illumina
26
Solyc04g009720.1
+
AltD
ch04:3053090-3054223;ch04:3053031-3053089;ch04:3052284-3053030
overlap(sense)
Pentatricopeptide repeat-containing protein (D7LY59_ARALY)
Illumina
--NA--
27
Solyc02g092530.2
-
IntronR
ch02:53598956-53599146;ch02:53598682-53598955;ch02:53597470-53598681
overlap(sense)
Formamidase (B9VXW6_LUPAL)
Illumina
28
Solyc02g092530.2
+
ExonS
ch02:53592193-53593749;ch02:53593751-53594032;ch02:53594033-53594781
down_1335bp
Formamidase (B9VXW6_LUPAL)
Illumina
29
Solyc03g111410.2
-
IntronR
ch03:62012608-62012678;ch03:62010397-62012607;ch03:62010237-62010396
down_44bp
B3 domain-containing protein Os01g0905400 (Y1054_ORYSJ)
Illumina
30
Solyc12g094640.1
-
AltD
ch12:64812935-64813401;ch12:64813402-64813585;ch12:64813587-64813688
overlap(antisense)
Glyceraldehyde-3-phosphate dehydrogenase B (B4F8L7_MAIZE)
Illumina
IDLocusAsregionStrandTypeCoordinatePositionSequence DescriptionSequencing PlatformInparanoid
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